Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015798529.1_cds_XP_016460801.1_5387
CDS Infomation

[gene=LOC107784232] [db_xref=GeneID:107784232] [protein=3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic-like] [protein_id=XP_016460801.1] [location=join(8810..9262,10035..10466,10756..10929,12328..12441,12549..12650,12746..12812,12983..13050)] [gbkey=CDS]
Sequence

ATGCAATCAATCCAATCTCCATCTTTCCGTCCATCTCCACTCGATCCACTCAAAAAAACC
GTCCCCCAATTCTCCAATGTGAGGTCATTGAGTCATGTCAAAAGAGTGCCCTTTATTTCA
GCTTCAGCCACCACTGTTTCCGCTCCAAAAAGAGAAAAAGACCCAAAGAAAAGGGTTGTT
ATAACTGGGATGGGCCTTGTTTCTGTGTTCGGTAATGACGTCGATACTTACTATGACAGA
CTTTTGGCTGGTGAAAGTGGGATTTCACTCATTGATCGTTTTGATGCTTCTAAGTTCCCC
ACAAGATTTGGGGGACAAATTCGTGGGTTTACATCAGACGGATATATTGATGGGAAGAAT
GATAGGAGACTTGATGATTGTCTTAGGTATGCCATTGTTGCTGGGAAAAAAGCTCTTGAA
AATGCAGATCTTGGTGGTGACAGACTTGGAAAGATTGATAAGGAGCGAGCAGGTATTCTG
GTAGGAACAGGAATGGGTGGTCTTACGGTTTTCTCAGATGGCGTCCAAAACCTTATTGAA
AAGGGTCACAGGAAAATTACTCCATTTTTTATACCATATGCCATAACAAACATGGGTTCT
GCCTTGCTTGGTATTGATCTTGGTTTTATGGGACCAAACTACTCAATCTCGACTGCTTGT
GCTACCTCCAATTATTGTTTTTATGCTGCCGCCAATCACATTCGCAGAGGTGAAGCTGAT
TTGATGCTAGCTGGTGGTACTGAAGCTGCCATAATACCTATTGGATTAGGAGGTTTTGTG
GCATGTAGAGCTTTGTCTCAAAGGAATGATGATCCACAAACTGCTTCCAGACCATGGGAC
AAAGAAAGAGATGGCTTTGTTATGGGCGAGGGGTCTGGAGTCTTGGTGATGGAAAGTTTG
GAGCATGCAATGAAACGAGGAGCGCCAATAATTGCAGAGTATTTGGGTGGTGCAGTTAAT
TGTGATGCTCATCACATGACTGATCCCCGAGCTGATGGTCTTGGTGTTTCGTCATGTATT
CAAAGCAGCCTTGAAGATGCTGGAGTGTCACCAGAAGAGGTTAATTACATCAATGCTCAT
GCAACTTCCACCATTGTTGGTGATATAGCAGAGGTAAATGCTATTAAGAAGGTATTCAAG
AACACCTCAGGAATCAAAATGAATGCAACCAAGTCTATGATAGGGCATTGCCTGGGCGCT
GCTGGTGGTATGGAAGCTATTGCAACAGTTAAAGCTATTACAACCGGCTGGGTGCATCCT
TCAATTAACCAATTTAATCCCGAGCCTTCAGTGGAGTTTGATACTGTTCCAAACAAAAAA
CAGCAGCATGAAGTGAATGTCGGAATCTCAAATTCCTTTGGTTTTGGTGGTCACAACTCT
GTCGTCGCCTTTTCTGCATTCAAGCCTTAA

Peptide Sequence

PEP ID

XP_016460801.1
PEP Infomation

PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic-like [Nicotiana tabacum]
Sequence

MQSIQSPSFRPSPLDPLKKTVPQFSNVRSLSHVKRVPFISASATTVSAPKREKDPKKRVV
ITGMGLVSVFGNDVDTYYDRLLAGESGISLIDRFDASKFPTRFGGQIRGFTSDGYIDGKN
DRRLDDCLRYAIVAGKKALENADLGGDRLGKIDKERAGILVGTGMGGLTVFSDGVQNLIE
KGHRKITPFFIPYAITNMGSALLGIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEAD
LMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKERDGFVMGEGSGVLVMESL
EHAMKRGAPIIAEYLGGAVNCDAHHMTDPRADGLGVSSCIQSSLEDAGVSPEEVNYINAH
ATSTIVGDIAEVNAIKKVFKNTSGIKMNATKSMIGHCLGAAGGMEAIATVKAITTGWVHP
SINQFNPEPSVEFDTVPNKKQQHEVNVGISNSFGFGGHNSVVAFSAFKP

Transcript Sequence

Gene sequence data has not been registered.